Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421878_1029 | Not Available | Positive | 312664 - 313428 | 28722.5 |
| hypothetical protein | SAMN05421878_10210 | Not Available | Negative | 313768 - 313971 | 7419.74 |
| crispr-associated protein cas2 | SAMN05421878_10211 | Not Available | Negative | 314388 - 314702 | 11439.5 |
| crisp-associated protein cas1 | SAMN05421878_10212 | Not Available | Negative | 314702 - 315775 | 38498.1 |
| crispr-associated endonuclease/helicase cas3 | SAMN05421878_10213 | Not Available | Negative | 315772 - 318501 | 99391.6 |
| crispr system cascade subunit case | SAMN05421878_10214 | Not Available | Negative | 318498 - 319235 | 26878.1 |
| crispr-associated protein cse1 (crispr_cse1) | SAMN05421878_10215 | Not Available | Positive | 319396 - 321030 | 61314.7 |
| crispr type i-e/ecoli-associated protein casb/cse2 | SAMN05421878_10216 | Not Available | Positive | 321035 - 321664 | 23820.9 |
| crispr system cascade subunit casc | SAMN05421878_10217 | Not Available | Positive | 321673 - 322764 | 39579.9 |
| crispr-associated protein cas5/casd, subtype i-e/ecoli | SAMN05421878_10218 | Not Available | Positive | 322764 - 323486 | 26812.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |