Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas2 | SAMN05421878_1184 | Not Available | Negative | 2053672 - 2054019 | 13057.9 |
| crisp-associated protein cas1 | SAMN05421878_1185 | Not Available | Negative | 2054030 - 2054956 | 34169.9 |
| crispr system cascade subunit case | SAMN05421878_1186 | Not Available | Negative | 2054959 - 2055627 | 24757.6 |
| crispr system cascade subunit casd | SAMN05421878_1187 | Not Available | Negative | 2055627 - 2056334 | 26374.4 |
| crispr system cascade subunit casc | SAMN05421878_1188 | Not Available | Negative | 2056338 - 2057480 | 41025.8 |
| crispr system cascade subunit casb | SAMN05421878_1189 | Not Available | Negative | 2057504 - 2058163 | 24188.8 |
| crispr system cascade subunit casa | SAMN05421878_11810 | Not Available | Negative | 2058160 - 2059887 | 64049.2 |
| hypothetical protein | SAMN05421878_11811 | Not Available | Negative | 2059945 - 2060181 | 8923.4 |
| crispr-associated endonuclease/helicase cas3 | SAMN05421878_11812 | Not Available | Negative | 2060183 - 2063038 | 105213.0 |
| hypothetical protein | SAMN05421878_11813 | Not Available | Negative | 2063150 - 2063353 | 7445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |