Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421878_10719 | Not Available | Positive | 1218216 - 1219370 | 39404.9 |
| pantoate--beta-alanine ligase | SAMN05421878_10720 | Not Available | Positive | 1219541 - 1220461 | 32415.1 |
| l-aspartate 1-decarboxylase | SAMN05421878_10721 | Not Available | Positive | 1220448 - 1221077 | 21028.7 |
| lysyl-trna synthetase, class 2 | SAMN05421878_10722 | Not Available | Positive | 1221479 - 1223011 | 57127.8 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN05421878_10723 | Not Available | Positive | 1223256 - 1224308 | 37146.2 |
| putative abc transport system atp-binding protein | SAMN05421878_10724 | Not Available | Positive | 1224326 - 1225213 | 31082.1 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05421878_10725 | Not Available | Positive | 1225206 - 1226993 | 61868.0 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421878_10726 | Not Available | Negative | 1227181 - 1228053 | 30965.3 |
| sugar lactone lactonase yvre | SAMN05421878_10727 | Not Available | Negative | 1228212 - 1229069 | 30759.7 |
| alpha/beta hydrolase fold | SAMN05421878_10728 | Not Available | Negative | 1229170 - 1230726 | 54917.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |