Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05421878_105112 | Not Available | Negative | 1063426 - 1064040 | 22160.8 |
| hypothetical protein | SAMN05421878_105113 | Not Available | Negative | 1064197 - 1064805 | 21451.1 |
| hypothetical protein | SAMN05421878_105114 | Not Available | Positive | 1064857 - 1065312 | 15719.9 |
| dna-binding transcriptional regulator, iclr family | SAMN05421878_105115 | Not Available | Negative | 1065309 - 1066076 | 28059.5 |
| predicted oxidoreductase | SAMN05421878_1061 | Not Available | Negative | 1066626 - 1067558 | 32612.8 |
| undecaprenyl-diphosphatase | SAMN05421878_1062 | Not Available | Positive | 1067611 - 1068453 | 30219.7 |
| l-cysteine:1d-myo-inositol 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | SAMN05421878_1063 | Not Available | Positive | 1068728 - 1070116 | 49495.8 |
| putative recb family exonuclease | SAMN05421878_1064 | Not Available | Positive | 1070204 - 1071202 | 36744.0 |
| trna (adenine57-n1/adenine58-n1)-methyltransferase | SAMN05421878_1065 | Not Available | Positive | 1071245 - 1072318 | 38837.9 |
| proteasome-associated atpase | SAMN05421878_1066 | Not Available | Positive | 1072396 - 1074021 | 59103.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |