Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa synthase | SAMN05421878_101197 | Not Available | Negative | 260915 - 262228 | 46493.5 |
| hydroxymethylglutaryl-coa reductase (nadph) | SAMN05421878_101198 | Not Available | Negative | 262602 - 263708 | 39156.7 |
| isopentenyl-diphosphate delta-isomerase | SAMN05421878_101199 | Not Available | Negative | 264039 - 265175 | 39795.5 |
| phosphomevalonate kinase | SAMN05421878_101200 | Not Available | Negative | 265191 - 266261 | 38010.3 |
| diphosphomevalonate decarboxylase | SAMN05421878_101201 | Not Available | Negative | 266254 - 267264 | 35436.2 |
| mevalonate kinase | SAMN05421878_101202 | Not Available | Negative | 267261 - 268244 | 33906.7 |
| Trna-his | Not Available | Not Available | Positive | 268808 - 268883 | Not Available |
| hypothetical protein | SAMN05421878_101204 | Not Available | Negative | 268981 - 269904 | 34586.8 |
| putative transport protein | SAMN05421878_101205 | Not Available | Positive | 270197 - 271765 | 54353.2 |
| hsp20 family protein | SAMN05421878_101206 | Not Available | Negative | 271900 - 272322 | 15403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |