Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol phosphate synthase, cyclase subunit/phosphoribosyl-atp pyrophosphohydrolase | SAMN05421878_1017 | Not Available | Negative | 6276 - 7868 | 56477.5 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | SAMN05421878_1018 | Not Available | Negative | 8175 - 8879 | 25654.7 |
| imidazoleglycerol-phosphate dehydratase | SAMN05421878_1019 | Not Available | Negative | 8876 - 9595 | 26008.8 |
| histidinol-phosphate aminotransferase | SAMN05421878_10110 | Not Available | Negative | 9738 - 10727 | 36714.7 |
| histidinol dehydrogenase | SAMN05421878_10111 | Not Available | Negative | 10777 - 12075 | 45976.4 |
| atp phosphoribosyltransferase | SAMN05421878_10112 | Not Available | Negative | 12072 - 12677 | 22314.0 |
| histidyl-trna synthetase | SAMN05421878_10113 | Not Available | Negative | 12692 - 13612 | 34002.2 |
| trpr-related protein yerc/yecd | SAMN05421878_10114 | Not Available | Positive | 13904 - 14209 | 11614.8 |
| Trna-asn | Not Available | Not Available | Positive | 14332 - 14406 | Not Available |
| hypothetical protein | SAMN05421878_10116 | Not Available | Negative | 14526 - 14843 | 11431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |