Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | SAMN05421878_1197 | Not Available | Positive | 2081396 - 2082001 | 22677.8 |
| large subunit ribosomal protein l35 | SAMN05421878_1198 | Not Available | Positive | 2082038 - 2082232 | 7671.67 |
| large subunit ribosomal protein l20 | SAMN05421878_1199 | Not Available | Positive | 2082259 - 2082642 | 14696.7 |
| hypothetical protein | SAMN05421878_11910 | Not Available | Positive | 2083464 - 2083763 | 11244.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421878_11911 | Not Available | Positive | 2083772 - 2084554 | 28435.5 |
| rna methyltransferase, trmh family | SAMN05421878_11912 | Not Available | Positive | 2084726 - 2085595 | 31339.4 |
| glucuronate isomerase | SAMN05421878_11913 | Not Available | Negative | 2085971 - 2087398 | 54090.6 |
| oligogalacturonide transporter | SAMN05421878_11914 | Not Available | Positive | 2087953 - 2089590 | 61223.2 |
| hypothetical protein | SAMN05421878_11915 | Not Available | Positive | 2089893 - 2090252 | 13697.5 |
| phenylalanyl-trna synthetase alpha chain | SAMN05421878_11916 | Not Available | Positive | 2090418 - 2091602 | 42123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |