Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s20 | SAMN05421878_11539 | Not Available | Negative | 1959358 - 1959621 | 9842.0 |
| ph domain-containing protein | SAMN05421878_11540 | Not Available | Negative | 1959864 - 1960496 | 23017.3 |
| pullulanase | SAMN05421878_11541 | Not Available | Positive | 1960835 - 1965994 | 182124.0 |
| hypothetical protein | SAMN05421878_11542 | Not Available | Positive | 1966047 - 1966154 | 3981.79 |
| hypothetical protein | SAMN05421878_1162 | Not Available | Positive | 1966710 - 1968698 | 73841.3 |
| haloacid dehalogenase superfamily class (subfamily) iia/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421878_1163 | Not Available | Positive | 1968703 - 1969719 | 35560.1 |
| hypothetical protein | SAMN05421878_1164 | Not Available | Positive | 1969823 - 1970095 | 9288.99 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05421878_1165 | Not Available | Positive | 1970095 - 1970976 | 30711.1 |
| nad+ kinase | SAMN05421878_1166 | Not Available | Positive | 1970969 - 1971817 | 30140.2 |
| dna repair protein recn (recombination protein n) | SAMN05421878_1167 | Not Available | Positive | 1971814 - 1973508 | 59473.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |