Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | SAMN05421878_11417 | Not Available | Negative | 1879640 - 1882405 | 97775.8 |
| cytochrome d ubiquinol oxidase subunit i | SAMN05421878_11418 | Not Available | Positive | 1883166 - 1884668 | 55590.7 |
| cytochrome d ubiquinol oxidase subunit ii | SAMN05421878_11419 | Not Available | Positive | 1884683 - 1885828 | 41837.7 |
| atp-binding cassette, subfamily c, cydd | SAMN05421878_11420 | Not Available | Positive | 1886151 - 1887983 | 65345.6 |
| atp-binding cassette, subfamily c, cydc | SAMN05421878_11421 | Not Available | Positive | 1887980 - 1889893 | 67219.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421878_11422 | Not Available | Positive | 1889890 - 1891509 | 57856.9 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421878_11423 | Not Available | Negative | 1891709 - 1892347 | 23268.6 |
| formamidopyrimidine-dna glycosylase | SAMN05421878_11424 | Not Available | Negative | 1892657 - 1893682 | 36423.7 |
| ribonuclease-3 | SAMN05421878_11425 | Not Available | Negative | 1893685 - 1894485 | 27891.3 |
| uncharacterized protein | SAMN05421878_11426 | Not Available | Negative | 1894561 - 1895130 | 20570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |