Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Actinobaculum |
| Species | Actinobaculum suis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Sus scrofa, Suidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | pigs |
Gene Summary
Adenine Count
463023 bp
Thymine Count
464834 bp
Guanine Count
634714 bp
Cytosine Count
637936 bp
Genome Length
2200507 bp
Protein-coding Genes
1723 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421878_10880 | Not Available | Positive | 1413785 - 1413964 | 6588.94 |
| hypothetical protein | SAMN05421878_10881 | Not Available | Positive | 1414308 - 1414730 | 15149.3 |
| helicase/secretion neighborhood tade-like protein | SAMN05421878_10882 | Not Available | Positive | 1415150 - 1415710 | 20208.7 |
| dead/deah box helicase domain-containing protein | SAMN05421878_10883 | Not Available | Negative | 1415780 - 1418164 | 85344.3 |
| methyltransferase small domain-containing protein | SAMN05421878_10884 | Not Available | Positive | 1418329 - 1420290 | 68659.1 |
| dna topoisomerase-1 | SAMN05421878_10885 | Not Available | Positive | 1420355 - 1423156 | 102340.0 |
| dtmp kinase | SAMN05421878_10886 | Not Available | Positive | 1423159 - 1423866 | 24706.5 |
| dna polymerase-3 subunit delta' | SAMN05421878_10887 | Not Available | Positive | 1423863 - 1425302 | 51751.7 |
| alpha/beta hydrolase fold | SAMN05421878_10888 | Not Available | Positive | 1425514 - 1427076 | 55557.4 |
| Trna-thr | Not Available | Not Available | Positive | 1427306 - 1427381 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections of the urogenital tract of sows | Causes | PMC7788979 |
| Infections of the urogenital tract in sows | Causes | PMC7788979 |
| Cystitis | Causes | PMC7788979 |
| Urinary tract infection | Causes | PMC6261818 |