Weissella viridescens str. UCO-SMC3

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella viridescens strain UCO-SMC3 is a rod-shaped bacterium characterized by its occurrence in pairs or as single cells. This strain is notably associated with the habitat of fermented pickles, indicating its potential role in the fermentation processes utilized in food production. The morphology of Weissella viridescens str. UCO-SMC3, comprising rod-shaped cells, supports its classification within the Weissella genus, which is often linked to lactic acid fermentation. The presence of this strain in fermented pickles suggests that it may contribute to the development of specific flavor profiles and preservation properties in these foods. The fermentation environment provides a niche where Weissella viridescens may thrive, likely engaging in metabolic activities that influence the overall microbial community dynamics in the fermenting substrate. Understanding the role of Weissella viridescens str. UCO-SMC3 in the fermentation of pickles may provide insights into its potential applications in enhancing food safety and quality in the production of fermented products. Given the strain's association with traditional food preservation methods, further investigation could reveal its contributions to the sensory attributes and health benefits of fermented pickles, highlighting the importance of microbial diversity in food ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella viridescens
StrainUCO-SMC3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Weissella viridescens str. UCO-SMC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented pickles
Biotic relationshipNot Available
Host(s)Bos taurus
Cell arrangementPairs; Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Weissella viridescens strain UCO-SMC3

Gene Summary

Adenine Count

478004 bp

Thymine Count

467444 bp

Guanine Count

355116 bp

Cytosine Count

312221 bp

Genome Length

1612814 bp

Protein-coding Genes

1540 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ireb family regulatory phosphoproteinD3P96_07855Not AvailablePositive1526391 - 15266399636.42
holliday junction resolvase ruvxD3P96_07860Not AvailablePositive1526639 - 152707315926.2
duf1292 domain-containing proteinD3P96_07865Not AvailablePositive1527088 - 152737811228.6
duf1292 domain-containing proteinD3P96_07870Not AvailablePositive1527430 - 152770210117.4
hypothetical proteinD3P96_07875Not AvailablePositive1527799 - 152843123324.1
dna internalization-related competence protein comec/rec2D3P96_07880Not AvailablePositive1528428 - 153066884684.0
dna polymerase iii subunit deltaD3P96_07885Not AvailablePositive1530732 - 153175738890.2
30s ribosomal protein s15D3P96_07890Not AvailablePositive1531897 - 153216610562.7
30s ribosomal protein s20D3P96_07895Not AvailablePositive1532221 - 15324759374.23
duf998 domain-containing proteinD3P96_07900Not AvailableNegative1532574 - 153374343749.3

Displaying genes 1561 – 1570 of 1657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

54 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 54 metabolites

Health Effects

No health effects information available for this bacterium.