Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape determining protein roda | SAMN05216431_10484 | Not Available | + | 693587 - 694798 | 45238.2 |
| fe-s cluster assembly atp-binding protein | SAMN05216431_10485 | Not Available | + | 694911 - 695690 | 28757.1 |
| fe-s cluster assembly protein sufd | SAMN05216431_10486 | Not Available | + | 695702 - 696979 | 46785.0 |
| cysteine desulfurase /l-selenocysteine selenide-lyase (l-alanine-forming) | SAMN05216431_10487 | Not Available | + | 696960 - 698198 | 45575.4 |
| nitrogen fixation protein nifu | SAMN05216431_10488 | Not Available | + | 698185 - 698640 | 16558.7 |
| iron-regulated abc transporter membrane component sufb | SAMN05216431_10489 | Not Available | + | 698633 - 700033 | 52392.1 |
| hypothetical protein | SAMN05216431_10490 | Not Available | - | 700644 - 700919 | 10189.3 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN05216431_10491 | Not Available | + | 701243 - 701947 | 26770.2 |
| pyroglutamyl-peptidase i cysteine peptidase. merops family c15 | SAMN05216431_10492 | Not Available | - | 702126 - 702761 | 23016.9 |
| ca2+-transporting atpase | SAMN05216431_10493 | Not Available | - | 702817 - 705471 | 96195.1 |
Pathways
1349 pathways
Lysine Biosynthesis
Lysine Biosynthesis
Ornithine Metabolism
Ornithine Metabolism
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
