Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216431_11058 | Not Available | - | 1443271 - 1443609 | 12121.3 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05216431_11059 | Not Available | - | 1443745 - 1444668 | 34433.1 |
| tryptophanyl-trna synthetase | SAMN05216431_11060 | Not Available | - | 1444681 - 1445706 | 38363.8 |
| hypothetical protein | SAMN05216431_11062 | Not Available | - | 1445964 - 1447148 | 43501.8 |
| dna helicase iv | SAMN05216431_11063 | Not Available | + | 1447256 - 1449511 | 85591.4 |
| Trna-thr | Not Available | Not Available | + | 1449562 - 1449634 | Not Available |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05216431_11065 | Not Available | + | 1450368 - 1451840 | 52490.5 |
| glutamate synthase (nadph/nadh) small chain | SAMN05216431_11066 | Not Available | - | 1451933 - 1453360 | 52509.3 |
| glutamate synthase (nadph/nadh) large chain | SAMN05216431_11067 | Not Available | - | 1453363 - 1457799 | 163320.0 |
| fructose-6-phosphate aldolase, talc/mipb family | SAMN05216431_11068 | Not Available | - | 1457951 - 1458652 | 25362.5 |
Pathways
1349 pathways
Lysine Biosynthesis
Lysine Biosynthesis
Ornithine Metabolism
Ornithine Metabolism
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
