Eubacterium barkeri

Gram-positiveanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium barkeri
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium barkeri strain VPI 5359 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2492 genes

Non-Coding Genes

340 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hipa-like c-terminal domain-containing proteinSAMN04488579_101209Not AvailablePositive253424 - 25432635064.0
hiran domain-containing proteinSAMN04488579_101210Not AvailablePositive254307 - 25500826836.1
prepilin-type n-terminal cleavage/methylation domain-containing proteinSAMN04488579_101211Not AvailablePositive255032 - 25563121434.1
ctp synthaseSAMN04488579_101212Not AvailablePositive255790 - 25741560230.6
nh(3)-dependent nad(+) synthetaseSAMN04488579_101213Not AvailablePositive257832 - 25978471497.6
trna (guanine-n(7)-)-methyltransferaseSAMN04488579_101214Not AvailableNegative259840 - 26049024808.7
bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligaseSAMN04488579_101215Not AvailableNegative260481 - 26149136000.1
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN04488579_101216Not AvailablePositive261723 - 26298247024.4
helix-turn-helix domain-containing proteinSAMN04488579_101217Not AvailablePositive262975 - 26404241089.2
bmc domain-containing proteinSAMN04488579_101218Not AvailablePositive264330 - 2646059322.4

Displaying genes 371 – 380 of 2832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039775Eubacterium barkeriNot availableNot availableNot available
BASm0040037Clostridium sticklandii DSM 519Not availableNot availableNot available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.