Eubacterium barkeri

Gram-positiveanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium barkeri
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium barkeri strain VPI 5359 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2492 genes

Non-Coding Genes

340 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle subunit ffh/srp54 (srp54)SAMN04488579_106129Not AvailablePositive1192540 - 119387749320.5
ssu ribosomal protein s16pSAMN04488579_106130Not AvailablePositive1193931 - 11941769131.35
hypothetical proteinSAMN04488579_106131Not AvailablePositive1194191 - 11944188256.34
16s rrna processing protein rimmSAMN04488579_106132Not AvailablePositive1194537 - 119504618882.8
trna (guanine37-n1)-methyltransferaseSAMN04488579_106133Not AvailablePositive1195043 - 119572325401.2
helix-turn-helix domain-containing proteinSAMN04488579_106134Not AvailableNegative1195794 - 119702047802.1
glycoside/pentoside/hexuronide:cation symporter, gph familySAMN04488579_106135Not AvailablePositive1197201 - 119861951775.3
beta-n-acetylhexosaminidaseSAMN04488579_106136Not AvailablePositive1198633 - 120035463108.4
mannonate dehydrataseSAMN04488579_106137Not AvailablePositive1200378 - 120144239476.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04488579_106138Not AvailablePositive1201445 - 120229329334.2

Displaying genes 1231 – 1240 of 2832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039775Eubacterium barkeriNot availableNot availableNot available
BASm0040037Clostridium sticklandii DSM 519Not availableNot availableNot available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.