[Clostridium] aminophilum

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain KH1P1 genome assembly, contig:

Gene Summary

Adenine Count

797015 bp

Thymine Count

779067 bp

Guanine Count

823249 bp

Cytosine Count

795937 bp

Genome Length

3198475 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN04487771_101144Not AvailableNegative1137111 - 113867960475.8
l-cysteine desulfidaseSAMN04487771_101145Not AvailableNegative1138934 - 114025646686.3
glyoxylase, beta-lactamase superfamily iiSAMN04487771_101146Not AvailableNegative1140401 - 114127933433.7
hypothetical proteinSAMN04487771_101147Not AvailablePositive1141669 - 114379878083.8
type i restriction enzyme, r subunitSAMN04487771_101148Not AvailableNegative1144052 - 1147414129343.0
leucine rich repeat-containing proteinSAMN04487771_101149Not AvailablePositive1147639 - 114915356520.2
hypothetical proteinSAMN04487771_101151Not AvailableNegative1149245 - 11494809029.06
trax proteinSAMN04487771_10122Not AvailableNegative1149839 - 115060628477.6
copper chaperone copzSAMN04487771_10123Not AvailablePositive1150966 - 115139715720.4
virus attachment protein p12 family proteinSAMN04487771_10124Not AvailablePositive1151508 - 11516785904.37

Displaying genes 941 – 950 of 2772 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm00045891-O-hexadecyl-sn-glycero-3-phosphocholineC24H52NO6PChemical structure of 1-O-hexadecyl-sn-glycero-3-phosphocholineNot available
Average481.655Da
Monoisotopic481.353225396Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.