[Clostridium] aminophilum

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain KH1P1 genome assembly, contig:

Gene Summary

Adenine Count

797015 bp

Thymine Count

779067 bp

Guanine Count

823249 bp

Cytosine Count

795937 bp

Genome Length

3198475 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN04487771_10555Not AvailableNegative2724890 - 272580735160.1
hypothetical proteinSAMN04487771_10556Not AvailableNegative2726018 - 27262067129.65
putative efflux protein, mate familySAMN04487771_10557Not AvailableNegative2726271 - 272760248033.8
flavodoxinSAMN04487771_10558Not AvailableNegative2727592 - 272804716858.1
transcriptional regulator, tetr familySAMN04487771_10559Not AvailableNegative2728130 - 272870521848.2
lactoylglutathione lyaseSAMN04487771_105510Not AvailableNegative2728946 - 272938616646.6
pimeloyl-acp methyl ester carboxylesteraseSAMN04487771_105511Not AvailableNegative2729629 - 273051333633.6
helix-turn-helix domain-containing proteinSAMN04487771_105512Not AvailableNegative2730654 - 273132525460.3
chloramphenicol o-acetyltransferase type aSAMN04487771_105513Not AvailableNegative2731450 - 273207323570.5
transcriptional regulator, tetr familySAMN04487771_105514Not AvailableNegative2732211 - 273280122948.7

Displaying genes 2341 – 2350 of 2772 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm00045891-O-hexadecyl-sn-glycero-3-phosphocholineC24H52NO6PChemical structure of 1-O-hexadecyl-sn-glycero-3-phosphocholineNot available
Average481.655Da
Monoisotopic481.353225396Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.