[Clostridium] aminophilum

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain KH1P1 genome assembly, contig:

Gene Summary

Adenine Count

797015 bp

Thymine Count

779067 bp

Guanine Count

823249 bp

Cytosine Count

795937 bp

Genome Length

3198475 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04487771_1001128Not AvailablePositive150034 - 1502227202.55
uncharacterized conserved protein yeao, duf488 familySAMN04487771_1001129Not AvailablePositive150219 - 15066517420.0
diguanylate cyclase (ggdef) domain-containing proteinSAMN04487771_1001130Not AvailablePositive150829 - 154326134995.0
d-alanyl-d-alanine dipeptidaseSAMN04487771_1001131Not AvailablePositive154615 - 15692186001.4
haloacid dehalogenase-like hydrolaseSAMN04487771_1001132Not AvailablePositive156944 - 15820046454.6
hypothetical proteinSAMN04487771_1001133Not AvailablePositive158494 - 1587279185.13
Trna-pseudoNot AvailableNot AvailablePositive158723 - 158802Not Available
diguanylate cyclase (ggdef) domain-containing proteinSAMN04487771_10022Not AvailableNegative159111 - 16121980259.7
radical sam superfamily proteinSAMN04487771_10023Not AvailableNegative161424 - 16182515667.0
hypothetical proteinSAMN04487771_10024Not AvailableNegative161779 - 16223717446.4

Displaying genes 131 – 140 of 2772 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm00045891-O-hexadecyl-sn-glycero-3-phosphocholineC24H52NO6PChemical structure of 1-O-hexadecyl-sn-glycero-3-phosphocholineNot available
Average481.655Da
Monoisotopic481.353225396Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.