Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail core protein | IM33_07375 | Not Available | + | 1492814 - 1493242 | 16008.2 |
| Xkdn-like protein | IM33_07380 | Not Available | + | 1493356 - 1493802 | 16847.7 |
| Putative tail tape measure protein | IM33_07390 | Not Available | + | 1493996 - 1496380 | 86687.7 |
| Hypothetical protein | IM33_07395 | Not Available | + | 1496380 - 1496799 | 16143.4 |
| Nlpc/p60 family protein | IM33_07400 | Q01837 | + | 1497084 - 1498613 | 57149.1 |
| Hypothetical protein | IM33_07405 | Not Available | + | 1498629 - 1498955 | 12585.2 |
| Phage protein xkds | IM33_07410 | Not Available | + | 1498955 - 1499383 | 16531.9 |
| Putative baseplate-j protein | IM33_07415 | Not Available | + | 1499376 - 1500428 | 39517.6 |
| Hypothetical protein | IM33_07420 | Not Available | + | 1500425 - 1501123 | 26445.9 |
| Tail fiber protein | IM33_07425 | Not Available | + | 1501124 - 1502110 | 36989.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.