Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | IM33_05300 | P45950 | Positive | 1069925 - 1071083 | 44711.2 |
| hypothetical protein | IM33_05305 | P45934 | Positive | 1071095 - 1071514 | 16186.3 |
| phage tail protein | IM33_05310 | Not Available | Positive | 1071515 - 1072564 | 39068.2 |
| hypothetical protein | IM33_05315 | Not Available | Positive | 1072557 - 1073174 | 24252.8 |
| tail protein | IM33_05320 | Not Available | Positive | 1073186 - 1073933 | 27107.2 |
| hypothetical protein | IM33_05325 | P54338 | Positive | 1073945 - 1074364 | 16251.5 |
| phage tail protein | IM33_05330 | P54339 | Positive | 1074365 - 1075414 | 39227.3 |
| hypothetical protein | IM33_05335 | Not Available | Positive | 1075407 - 1076024 | 24062.4 |
| tail protein | IM33_05340 | Not Available | Positive | 1076040 - 1076766 | 26447.3 |
| Trna-ser | Not Available | Not Available | Positive | 1076767 - 1076855 | Not Available |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
