Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | IM33_04460 | A3DE07 | Positive | 920777 - 921943 | 42809.6 |
| membrane protein | IM33_04465 | E5QVT2 | Positive | 922245 - 922853 | 21775.8 |
| hypothetical protein | IM33_04470 | Not Available | Positive | 923186 - 924226 | 40987.7 |
| atpase | IM33_04475 | O05515 | Positive | 924365 - 924817 | 17274.8 |
| glycoprotease | IM33_04480 | O05516 | Positive | 924817 - 925533 | 26589.1 |
| 30s ribosomal protein s18 | IM33_04485 | O05517 | Positive | 925523 - 925999 | 18350.1 |
| o-sialoglycoprotein endopeptidase | IM33_04490 | Q18CP0 | Positive | 926005 - 927021 | 36480.8 |
| mfs transporter | IM33_04495 | C9XIS5 | Positive | 927318 - 930026 | 101359.0 |
| mfs transporter | IM33_04500 | C9XIS6 | Positive | 930030 - 930287 | 9520.42 |
| mfs transporter | IM33_04505 | C9XIS7 | Positive | 930280 - 931230 | 36099.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
