Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | IM33_04075 | Not Available | Negative | 849112 - 849546 | 16850.4 |
| peptide abc transporter permease | IM33_04080 | Not Available | Positive | 849873 - 850859 | 37097.3 |
| peptide abc transporter permease | IM33_04085 | P26904 | Positive | 850843 - 851754 | 33737.8 |
| peptide abc transporter substrate-binding protein | IM33_04090 | P06109 | Positive | 851867 - 853435 | 58507.5 |
| peptide abc transporter atp-binding protein | IM33_04095 | P24136 | Positive | 853510 - 854535 | 37886.3 |
| peptide abc transporter atpase | IM33_04100 | P24137 | Positive | 854528 - 855472 | 35572.8 |
| rna polymerase subunit sigma-54 | IM33_04105 | Not Available | Positive | 855831 - 858488 | 101148.0 |
| hypothetical protein | IM33_04110 | Not Available | Positive | 858703 - 859332 | 24534.3 |
| pts lactose transporter subunit iib | IM33_04115 | Not Available | Positive | 859444 - 859770 | 12033.6 |
| pts lactose transporter subunit iic | IM33_04120 | Not Available | Positive | 859790 - 861079 | 46944.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
