Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | IM33_03790 | P11989 | Positive | 787802 - 788614 | 31914.5 |
| transposase | IM33_03795 | Q7DF80 | Positive | 789173 - 789784 | 23956.1 |
| transposase | IM33_03805 | P54992 | Positive | 790612 - 791186 | 22105.0 |
| transposase | IM33_03810 | Not Available | Positive | 791187 - 791774 | 22626.5 |
| atp-binding protein | IM33_03820 | Not Available | Positive | 793646 - 795844 | 77483.7 |
| preprotein translocase subunit seca | IM33_03825 | Q183M9 | Positive | 796090 - 798432 | 89087.0 |
| cell wall-binding protein | IM33_03830 | Not Available | Positive | 798846 - 800717 | 66563.2 |
| hypothetical protein | IM33_03835 | Not Available | Positive | 800827 - 801534 | 27084.9 |
| cell surface protein | IM33_03840 | Not Available | Positive | 801567 - 803699 | 77686.5 |
| teichoic acid glycosylation protein | IM33_03845 | P58412 | Negative | 803751 - 804146 | 15545.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
