Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | IM33_03315 | Q183T0 | Negative | 673441 - 674538 | 41221.4 |
| carbohydrate kinase | IM33_03320 | Q9X1E4 | Positive | 674830 - 676356 | 56366.6 |
| ethanolamine utilization protein euth | IM33_03325 | Not Available | Positive | 676397 - 677512 | 38707.7 |
| alkaline phosphatase | IM33_03330 | O05261 | Negative | 677692 - 678456 | 28169.2 |
| Trna-ser | Not Available | Not Available | Positive | 678716 - 678806 | Not Available |
| flagellar motor protein mota | IM33_03340 | P28611 | Positive | 678901 - 679689 | 28285.9 |
| chemotaxis protein motb | IM33_03345 | P28612 | Positive | 679710 - 680450 | 27620.7 |
| membrane protein | IM33_03350 | Not Available | Positive | 680630 - 681004 | 14321.1 |
| hypothetical protein | IM33_03355 | Not Available | Positive | 681097 - 682557 | 54900.8 |
| diguanylate phosphodiesterase | IM33_03360 | Not Available | Positive | 682610 - 685639 | 116708.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
