Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | IM33_03065 | Not Available | Positive | 612825 - 613406 | 22024.9 |
| hypothetical protein | IM33_03070 | Not Available | Positive | 613403 - 613597 | 7183.34 |
| peptidase m3 | IM33_03075 | Not Available | Negative | 613858 - 615600 | 68343.9 |
| atp synthase subunit j | IM33_03080 | P43440 | Positive | 616029 - 617405 | 48948.6 |
| potassium transporter trk | IM33_03085 | P39760 | Positive | 617490 - 618161 | 24263.6 |
| rna methyltransferase | IM33_03090 | P94538 | Positive | 618357 - 619154 | 29892.2 |
| phenylalanine--trna ligase | IM33_03095 | A6TNP8 | Positive | 619657 - 620676 | 37994.9 |
| phenylalanyl-trna synthetase subunit beta | IM33_03100 | Q8R9C7 | Positive | 620693 - 623086 | 89343.8 |
| cell division protein zapa | IM33_03105 | Not Available | Positive | 623110 - 623700 | 22120.3 |
| membrane protein | IM33_03110 | Not Available | Positive | 623927 - 624610 | 25996.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
