Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_02590 | Not Available | Negative | 509354 - 509575 | 7739.3 |
| transcriptional regulator | IM33_02595 | Not Available | Positive | 510135 - 510392 | 9955.28 |
| hypothetical protein | IM33_02600 | Not Available | Positive | 510842 - 512323 | 57266.5 |
| helicase dnab | IM33_02605 | Q6ABX1 | Positive | 512775 - 514076 | 49560.9 |
| transcriptional regulator | IM33_02610 | Not Available | Positive | 514152 - 514427 | 10806.5 |
| ferredoxin | IM33_02615 | Not Available | Positive | 515373 - 515603 | 8101.09 |
| membrane protein | IM33_02620 | Not Available | Positive | 515804 - 516367 | 21863.5 |
| abc transporter atp-binding protein | IM33_02625 | Q2HIE9 | Positive | 516780 - 518465 | 64606.1 |
| crp/fnr family transcriptional regulator | IM33_02630 | Not Available | Negative | 518945 - 519622 | 25336.6 |
| multidrug transporter mate | IM33_02635 | Not Available | Negative | 520138 - 521502 | 48847.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
