Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna methyltransferase | IM33_02360 | O31590 | Positive | 459255 - 459725 | 17791.3 |
| 6-phosphogluconate dehydratase | IM33_02365 | Not Available | Positive | 459760 - 460608 | 31406.0 |
| hypothetical protein | IM33_02370 | A2RK47 | Positive | 461063 - 462067 | 36658.2 |
| hypothetical protein | IM33_02375 | Q45010 | Positive | 462193 - 463305 | 41655.5 |
| hypothetical protein | IM33_02380 | Not Available | Positive | 463561 - 464322 | 29351.8 |
| hypothetical protein | IM33_02385 | Not Available | Positive | 464352 - 465143 | 31202.9 |
| membrane protein | IM33_02390 | Q929E9 | Positive | 465308 - 465910 | 22802.6 |
| threonyl-trna synthetase | IM33_02395 | Q189B8 | Positive | 466735 - 468654 | 73547.2 |
| hypothetical protein | IM33_02400 | Not Available | Positive | 468857 - 469948 | 42715.0 |
| histidine kinase | IM33_02405 | Not Available | Positive | 470788 - 472131 | 51584.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
