Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4217692 - 4217782 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 4217803 - 4217891 | Not Available |
| fe-s oxidoreductase | IM33_20145 | Q2FX88 | Negative | 4218135 - 4219172 | 40805.4 |
| lysr family transcriptional regulator | IM33_20150 | P33634 | Positive | 4219317 - 4220204 | 33628.0 |
| hypothetical protein | IM33_20155 | Not Available | Negative | 4220408 - 4220827 | 15200.6 |
| pyridoxamine 5-phosphate oxidase | IM33_20160 | Not Available | Negative | 4220945 - 4221340 | 14728.9 |
| hxlr family transcriptional regulator | IM33_20165 | Not Available | Positive | 4221481 - 4221873 | 14780.2 |
| integrase | IM33_20185 | Not Available | Positive | 4225001 - 4225147 | 5512.79 |
| dna-binding protein | IM33_20190 | Not Available | Negative | 4225468 - 4225704 | 8741.63 |
| hypothetical protein | IM33_20200 | Not Available | Positive | 4227496 - 4228092 | 23088.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
