Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_19830 | Not Available | Negative | 4186350 - 4186670 | 12429.3 |
| 30s ribosomal protein s18 | IM33_19835 | Q181R4 | Negative | 4186812 - 4187039 | 8893.15 |
| single-stranded dna-binding protein | IM33_19840 | Not Available | Negative | 4187058 - 4187492 | 16003.7 |
| 30s ribosomal protein s6 | IM33_19845 | Q181R5 | Negative | 4187529 - 4187807 | 10538.9 |
| aminotransferase | IM33_19850 | H3ZPL1 | Negative | 4188024 - 4189220 | 44872.3 |
| hypothetical protein | IM33_19855 | Not Available | Negative | 4189323 - 4189508 | 7135.22 |
| hypothetical protein | IM33_19860 | Not Available | Negative | 4189623 - 4189886 | 9823.89 |
| sira family protein | IM33_19865 | Not Available | Negative | 4189965 - 4190567 | 22136.7 |
| transcriptional regulator | IM33_19870 | Not Available | Negative | 4190672 - 4191964 | 50850.3 |
| hypothetical protein | IM33_19875 | Not Available | Positive | 4192224 - 4192799 | 21244.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
