Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | IM33_19370 | P54604 | Positive | 4093420 - 4094085 | 25687.1 |
| merr family transcriptional regulator | IM33_19375 | Not Available | Positive | 4094106 - 4094963 | 33475.8 |
| abc transporter permease | IM33_19380 | Not Available | Negative | 4095101 - 4097647 | 93948.2 |
| peptide abc transporter atp-binding protein | IM33_19385 | Q8KF76 | Negative | 4097647 - 4098333 | 25483.9 |
| histidine kinase | IM33_19390 | Q06240 | Negative | 4098416 - 4099405 | 37145.2 |
| transcriptional regulator | IM33_19395 | A0QTK2 | Negative | 4099392 - 4100078 | 25477.9 |
| transposase | IM33_19400 | Not Available | Negative | 4100075 - 4100212 | 5318.31 |
| padr family transcriptional regulator | IM33_19405 | C0H3S6 | Positive | 4100488 - 4100817 | 12725.2 |
| hypothetical protein | IM33_19410 | Not Available | Positive | 4100822 - 4101271 | 17203.1 |
| dna polymerase iii subunit delta | IM33_19415 | Not Available | Positive | 4101330 - 4101707 | 14997.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
