Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_19320 | Not Available | Negative | 4084216 - 4084926 | 27885.5 |
| hypothetical protein | IM33_19325 | Not Available | Negative | 4085099 - 4085629 | 20111.9 |
| hypothetical protein | IM33_19330 | Not Available | Negative | 4085646 - 4085876 | 8921.61 |
| sodium:solute symporter | IM33_19335 | Not Available | Negative | 4085891 - 4087285 | 50429.1 |
| transporter | IM33_19340 | P32135 | Negative | 4087411 - 4088664 | 46039.0 |
| methionine gamma-lyase | IM33_19345 | Q73KL7 | Negative | 4088715 - 4089869 | 41793.6 |
| resolvase | IM33_19350 | P06693 | Negative | 4090419 - 4090988 | 21563.4 |
| hypothetical protein | IM33_19355 | Not Available | Positive | 4091191 - 4091418 | 8936.04 |
| hypothetical protein | IM33_19360 | Not Available | Negative | 4091637 - 4092380 | 28920.9 |
| sam-dependent methyltransferase | IM33_19365 | Q9JYY8 | Positive | 4092548 - 4093420 | 33151.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
