Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | IM33_17770 | Not Available | Negative | 3776865 - 3777731 | 32940.9 |
| hypothetical protein | IM33_17775 | Not Available | Positive | 3777881 - 3778126 | 8608.38 |
| folylpolyglutamate synthase | IM33_17780 | Q05865 | Negative | 3778248 - 3779543 | 48329.3 |
| serine protease | IM33_17785 | Not Available | Negative | 3779662 - 3780681 | 39255.0 |
| transporter | IM33_17790 | O07942 | Positive | 3781503 - 3782207 | 26313.1 |
| transporter | IM33_17795 | Not Available | Positive | 3782197 - 3782520 | 11739.2 |
| chemotaxis protein chey | IM33_17800 | Q81JL3 | Negative | 3782788 - 3783498 | 27842.2 |
| valyl-trna synthetase | IM33_17805 | Q891R5 | Negative | 3783919 - 3786585 | 103041.0 |
| polysaccharide deacetylase | IM33_17810 | Q81EJ6 | Negative | 3787236 - 3788063 | 31612.0 |
| iron hydrogenase | IM33_17815 | Not Available | Negative | 3788111 - 3789565 | 54360.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
