Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma70 factor | IM33_17650 | Not Available | Negative | 3753206 - 3753739 | 21208.5 |
| hypoxanthine phosphoribosyltransferase | IM33_17655 | O66821 | Negative | 3753957 - 3754496 | 20411.5 |
| hypothetical protein | IM33_17660 | Q17ZX7 | Negative | 3754758 - 3756065 | 46247.2 |
| atpase aaa | IM33_17665 | Not Available | Negative | 3756533 - 3758308 | 67120.9 |
| hypothetical protein | IM33_17675 | Not Available | Negative | 3758520 - 3759089 | 21802.5 |
| single-stranded dna-binding protein | IM33_17680 | Not Available | Negative | 3759273 - 3759908 | 24672.7 |
| permease | IM33_17685 | Not Available | Negative | 3760576 - 3761457 | 30635.2 |
| hypothetical protein | IM33_17690 | Q17ZY4 | Negative | 3761577 - 3762584 | 36178.8 |
| proline reductase | IM33_17700 | Q9Z4P6 | Negative | 3763004 - 3763471 | 16981.1 |
| proline reductase | IM33_17705 | Not Available | Negative | 3763486 - 3764244 | 28269.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
