Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | IM33_17590 | O32253 | Negative | 3737232 - 3738254 | 38041.6 |
| rna polymerase sigma54 factor | IM33_17595 | P38944 | Negative | 3738985 - 3740331 | 52012.4 |
| aldehyde oxidoreductase | IM33_17605 | Not Available | Negative | 3740483 - 3743044 | 92530.0 |
| phenylhydantoinase | IM33_17610 | Not Available | Negative | 3743038 - 3744429 | 51698.3 |
| diguanylate cyclase | IM33_17615 | Q8TT55 | Negative | 3744646 - 3745755 | 39072.6 |
| uracil permease | IM33_17620 | Q46821 | Negative | 3745843 - 3747195 | 47375.4 |
| chlorohydrolase | IM33_17625 | Q46812 | Negative | 3747339 - 3748667 | 49225.8 |
| d-aminoacylase | IM33_17630 | P72349 | Negative | 3748695 - 3750278 | 58979.9 |
| peptidase m20 | IM33_17635 | Not Available | Negative | 3750294 - 3750734 | 16418.2 |
| hypothetical protein | IM33_17645 | Not Available | Negative | 3751926 - 3753143 | 45895.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
