Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt abc transporter permease | IM33_01385 | Q05598 | Positive | 242099 - 242797 | 26882.0 |
| abc transporter atp-binding protein | IM33_01390 | Q92CK1 | Positive | 242790 - 243608 | 31103.9 |
| atp-dependent dna helicase pcra | IM33_01395 | O34580 | Positive | 243859 - 246123 | 86286.2 |
| aminopeptidase | IM33_01400 | A0PYH7 | Positive | 246140 - 247438 | 48104.2 |
| phospholipase | IM33_01405 | Not Available | Positive | 247469 - 248221 | 27951.2 |
| peptidylprolyl isomerase | IM33_01410 | P35137 | Positive | 248286 - 248810 | 18971.6 |
| inorganic pyrophosphatase | IM33_01420 | Q8XIQ9 | Negative | 251277 - 252875 | 59370.4 |
| acetaldehyde dehydrogenase | IM33_01425 | Not Available | Positive | 253754 - 256396 | 96210.4 |
| hypothetical protein | IM33_01430 | Not Available | Negative | 256757 - 257098 | 13344.0 |
| peptide abc transporter atp-binding protein | IM33_01435 | Not Available | Negative | 257125 - 257796 | 24777.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
