Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | IM33_01330 | P37374 | Positive | 231165 - 231530 | 14081.0 |
| atpase | IM33_01335 | O32219 | Positive | 231553 - 233940 | 86526.0 |
| membrane protein | IM33_01345 | Not Available | Positive | 234791 - 235399 | 22538.5 |
| hypothetical protein | IM33_01350 | Not Available | Negative | 235611 - 236252 | 23563.7 |
| abc transporter | IM33_01355 | Q5WNX0 | Negative | 236240 - 237106 | 32826.7 |
| gntr family transcriptional regulator | IM33_01360 | O34712 | Negative | 237121 - 237492 | 13924.9 |
| atpase | IM33_01365 | Not Available | Positive | 237841 - 238770 | 35175.4 |
| nitric oxide reductase activation-like protein | IM33_01370 | Not Available | Positive | 238784 - 240559 | 68489.2 |
| cobalt abc transporter | IM33_01375 | C9YID6 | Positive | 241070 - 241822 | 26480.7 |
| cobalamin biosynthesis protein cbin | IM33_01380 | Q8YQ90 | Positive | 241812 - 242096 | 9968.15 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
