Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna exonuclease | IM33_15365 | O32044 | Negative | 3194135 - 3196585 | 93864.9 |
| ubiquinone biosynthesis protein | IM33_15370 | Q46189 | Negative | 3196598 - 3198262 | 63945.5 |
| hypothetical protein | IM33_15375 | Q9C6B3 | Negative | 3198560 - 3199057 | 18075.5 |
| radical sam protein | IM33_15380 | Not Available | Negative | 3199086 - 3200465 | 52998.9 |
| autoinducer | IM33_15385 | Not Available | Negative | 3200760 - 3200906 | 5346.69 |
| accessory gene regulator | IM33_15390 | Not Available | Negative | 3200910 - 3201515 | 23409.5 |
| hypothetical protein | IM33_15395 | Not Available | Negative | 3201871 - 3203301 | 55500.1 |
| hypothetical protein | IM33_15400 | Not Available | Positive | 3203623 - 3204288 | 25619.5 |
| phosphoenolpyruvate-protein phosphotransferase | IM33_15405 | O69251 | Negative | 3204950 - 3206662 | 63255.7 |
| phosphocarrier protein hpr | IM33_15410 | Q9K708 | Negative | 3206921 - 3207181 | 9079.13 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
