Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_14845 | Not Available | Positive | 3098065 - 3098526 | 17723.4 |
| spore protein | IM33_14855 | P22065 | Negative | 3098978 - 3099199 | 8051.6 |
| fad-dependent oxidoreductase | IM33_14860 | Q795R8 | Negative | 3099283 - 3100509 | 45427.3 |
| membrane protein | IM33_14865 | Q57819 | Negative | 3100570 - 3101502 | 35067.3 |
| hypoxanthine phosphoribosyltransferase | IM33_14870 | P18134 | Negative | 3101591 - 3102118 | 19574.8 |
| aminotransferase | IM33_14875 | Q8Z8H8 | Positive | 3102347 - 3103423 | 40969.1 |
| sodium:dicarboxylate symporter | IM33_14880 | O57321 | Negative | 3103603 - 3104811 | 42028.8 |
| hypothetical protein | IM33_14885 | Not Available | Negative | 3104972 - 3105361 | 14943.6 |
| asparagine synthase | IM33_14890 | Q897F7 | Negative | 3105465 - 3106466 | 38134.8 |
| cystathionine beta-lyase | IM33_14895 | Not Available | Negative | 3106913 - 3108103 | 45784.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
