Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_14160 | Not Available | Negative | 2951820 - 2952344 | 20187.9 |
| phosphopantetheine adenylyltransferase | IM33_14165 | Q895N8 | Negative | 2952348 - 2952845 | 18410.4 |
| rna methyltransferase | IM33_14170 | O34331 | Negative | 2952847 - 2953401 | 21016.4 |
| atp-dependent dna helicase recg | IM33_14175 | O34942 | Negative | 2953460 - 2955517 | 77830.1 |
| dihydroxyacetone kinase | IM33_14185 | O34751 | Negative | 2955598 - 2957241 | 59956.2 |
| alkaline-shock protein | IM33_14190 | O34318 | Negative | 2957260 - 2957610 | 12823.6 |
| 50s ribosomal protein l28 | IM33_14195 | Q182Q0 | Positive | 2957971 - 2958159 | 6779.35 |
| 2-oxoglutarate translocator | IM33_14200 | Not Available | Negative | 2958319 - 2958471 | 5352.07 |
| hypothetical protein | IM33_14205 | Not Available | Negative | 2958569 - 2959045 | 18605.5 |
| merr family transcriptional regulator | IM33_14210 | P71039 | Positive | 2959264 - 2960025 | 29617.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
