Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase recx | IM33_14005 | Q182L1 | Positive | 2913941 - 2914579 | 25133.1 |
| 1,4-alpha-glucan branching protein | IM33_14015 | Q8NKE1 | Positive | 2914731 - 2916734 | 77420.8 |
| tetr family transcriptional regulator | IM33_14020 | Not Available | Positive | 2916908 - 2917549 | 24837.8 |
| hypothetical protein | IM33_14025 | Not Available | Positive | 2917642 - 2918325 | 26651.1 |
| hypothetical protein | IM33_14030 | Not Available | Negative | 2918453 - 2918764 | 12255.7 |
| arac family transcriptional regulator | IM33_14035 | Not Available | Negative | 2918842 - 2919660 | 32190.1 |
| membrane protein | IM33_14040 | Not Available | Negative | 2919760 - 2920284 | 18893.0 |
| hypothetical protein | IM33_14045 | Not Available | Negative | 2920303 - 2921445 | 42346.8 |
| abc transporter permease | IM33_14050 | Not Available | Negative | 2921711 - 2924107 | 89057.7 |
| abc transporter atp-binding protein | IM33_14055 | Not Available | Negative | 2924091 - 2924774 | 25135.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
