Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_13750 | Not Available | Positive | 2855486 - 2855725 | 9465.01 |
| 30s ribosomal protein s20 | IM33_13755 | Q182G1 | Positive | 2855938 - 2856204 | 9725.01 |
| dna polymerase iii subunit delta | IM33_13760 | Not Available | Negative | 2856394 - 2857437 | 40314.0 |
| competence protein | IM33_13765 | P39695 | Negative | 2857391 - 2858671 | 49039.3 |
| gnat family acetyltraansferase | IM33_13770 | Not Available | Negative | 2858807 - 2859991 | 46288.5 |
| hypothetical protein | IM33_13775 | P33275 | Negative | 2860000 - 2860905 | 35879.6 |
| metallo beta-lactamase | IM33_13780 | Not Available | Positive | 2861092 - 2861928 | 31607.5 |
| thiamine biosynthesis protein thif | IM33_13785 | O32037 | Negative | 2862055 - 2862762 | 25924.7 |
| hydrolase | IM33_13790 | Not Available | Negative | 2863254 - 2864093 | 30450.4 |
| uracil-dna glycosylase | IM33_13795 | Q182G9 | Negative | 2864342 - 2865016 | 25942.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
