Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase | IM33_13330 | Q07259 | Negative | 2750535 - 2751551 | 39020.2 |
| dna polymerase iii subunit epsilon | IM33_13335 | Q9ZHF6 | Negative | 2751679 - 2752185 | 19549.8 |
| hypothetical protein | IM33_13340 | Not Available | Negative | 2752344 - 2753012 | 26137.0 |
| flavin reductase | IM33_13345 | Not Available | Negative | 2753426 - 2753932 | 19478.2 |
| exonuclease | IM33_13350 | Not Available | Negative | 2754356 - 2755384 | 40673.9 |
| restriction endonuclease ecoei subunit s | IM33_13355 | A1AUS1 | Negative | 2755432 - 2756292 | 33047.3 |
| hypothetical protein | IM33_13360 | Not Available | Positive | 2756561 - 2756770 | 8138.9 |
| polypeptide composition of the spore coat protein cotjb | IM33_13365 | Not Available | Positive | 2756770 - 2757036 | 10499.1 |
| cotjc | IM33_13370 | Q45538 | Positive | 2757065 - 2757637 | 21397.6 |
| cell wall hydrolase | IM33_13375 | Not Available | Negative | 2757877 - 2759067 | 41931.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
