Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motp | IM33_01020 | P39063 | Positive | 173991 - 174809 | 29934.8 |
| chemotaxis protein motb | IM33_01025 | P39064 | Positive | 174799 - 175494 | 25762.6 |
| flagellar basal body protein flil | IM33_01030 | Not Available | Positive | 175506 - 175949 | 16599.3 |
| flagellar biosynthesis protein fliz | IM33_01035 | Not Available | Positive | 175964 - 176338 | 14491.3 |
| flagellar biosynthesis protein flip | IM33_01040 | P35528 | Positive | 176339 - 177004 | 24863.8 |
| flagellar biosynthesis protein fliq | IM33_01045 | P0CF98 | Positive | 177017 - 177286 | 9691.44 |
| flagellar biosynthesis protein flhb | IM33_01050 | P35538 | Positive | 177298 - 179112 | 68396.6 |
| flagellar biosynthesis protein flha | IM33_01055 | P35620 | Positive | 179121 - 181196 | 75601.0 |
| flagellar biosynthesis regulator flhf | IM33_01060 | O67266 | Positive | 181171 - 182187 | 38188.4 |
| flagellar number regulator flhg | IM33_01065 | P40742 | Positive | 182184 - 183062 | 32404.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
