Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_12040 | Not Available | Positive | 2474307 - 2474984 | 27583.7 |
| 3-dehydroquinate dehydratase | IM33_12045 | Q186A6 | Negative | 2475536 - 2476303 | 28772.4 |
| acetyltransferase | IM33_12050 | P50870 | Positive | 2476741 - 2477373 | 24035.6 |
| methyltransferase | IM33_12055 | Not Available | Negative | 2477578 - 2478447 | 33117.6 |
| thioesterase | IM33_12060 | Not Available | Negative | 2478544 - 2479416 | 32452.4 |
| membrane protein | IM33_12065 | Not Available | Negative | 2479616 - 2481634 | 77207.6 |
| nitrite transporter nirc | IM33_12070 | P25926 | Negative | 2481908 - 2482684 | 27273.2 |
| sulfite reductase | IM33_12075 | Not Available | Negative | 2482742 - 2483713 | 36486.5 |
| sulfite reductase | IM33_12080 | P26475 | Negative | 2483726 - 2484517 | 29645.7 |
| sulfite reductase subunit a | IM33_12085 | P26474 | Negative | 2484518 - 2485525 | 39013.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
