Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | IM33_11735 | P96603 | Negative | 2401669 - 2402730 | 37182.5 |
| amino acid abc transporter atp-binding protein | IM33_11740 | P54954 | Negative | 2403070 - 2403819 | 27823.1 |
| peptidase | IM33_11745 | Not Available | Negative | 2403947 - 2405122 | 42860.0 |
| amino acid abc transporter substrate-binding protein | IM33_11750 | P52626 | Negative | 2405255 - 2406052 | 29141.7 |
| abc transporter permease | IM33_11755 | P52625 | Negative | 2406112 - 2406774 | 24572.0 |
| abc transporter permease | IM33_11760 | Not Available | Negative | 2407008 - 2407676 | 24730.0 |
| amino acid abc transporter substrate-binding protein | IM33_11765 | P0AEN0 | Negative | 2407669 - 2408472 | 29809.7 |
| methionine abc transporter permease | IM33_11770 | Q9KTJ6 | Negative | 2408496 - 2409152 | 23520.7 |
| hypothetical protein | IM33_11775 | Not Available | Negative | 2409145 - 2410113 | 36594.1 |
| hypothetical protein | IM33_11780 | Q9KTJ7 | Negative | 2410209 - 2411048 | 30934.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
