Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | IM33_11635 | O07603 | Positive | 2380923 - 2381963 | 38482.7 |
| iron-only hydrogenase system regulator | IM33_11640 | Not Available | Positive | 2382344 - 2382595 | 8878.09 |
| atp-binding protein | IM33_11645 | Q7M7W8 | Positive | 2382610 - 2383818 | 44185.1 |
| biotin synthase | IM33_11650 | Q9X0Z6 | Positive | 2383855 - 2384940 | 42043.3 |
| thiamine biosynthesis protein thih | IM33_11655 | Q46E78 | Positive | 2384941 - 2386317 | 52061.5 |
| hypothetical protein | IM33_11660 | Not Available | Positive | 2386408 - 2386842 | 16762.1 |
| 4-aminobutyrate aminotransferase | IM33_11665 | M1GRN3 | Negative | 2386917 - 2388236 | 47977.8 |
| membrane protein | IM33_11670 | Not Available | Negative | 2388528 - 2389316 | 30731.7 |
| membrane protein | IM33_11675 | Not Available | Negative | 2389431 - 2390390 | 36479.6 |
| membrane protein | IM33_11680 | Not Available | Negative | 2390548 - 2390865 | 12125.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
