Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | IM33_11580 | Not Available | Negative | 2367472 - 2368656 | 44187.0 |
| transporter | IM33_11585 | Not Available | Negative | 2368760 - 2369818 | 41345.0 |
| transcriptional regulator | IM33_11590 | Not Available | Negative | 2370015 - 2370659 | 24547.5 |
| membrane protein | IM33_11595 | Not Available | Positive | 2370847 - 2371470 | 22707.5 |
| mannonate oxidoreductase | IM33_11600 | A8MHU4 | Negative | 2371526 - 2373442 | 72445.5 |
| peptide chain release factor h | IM33_11605 | O27634 | Negative | 2373979 - 2375046 | 40216.9 |
| serine/threonine protein kinase | IM33_11610 | Q9CEF5 | Negative | 2375298 - 2376272 | 37273.2 |
| vancomycin resistance protein | IM33_11615 | O34611 | Negative | 2376464 - 2377723 | 46338.1 |
| endonuclease | IM33_11620 | Not Available | Negative | 2377962 - 2378591 | 24019.4 |
| hypothetical protein | IM33_11630 | Not Available | Negative | 2379288 - 2380448 | 41674.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
