Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | IM33_11530 | Q185R8 | Negative | 2360036 - 2361190 | 43096.5 |
| cro/cl family transcriptional regulator | IM33_11535 | Not Available | Negative | 2361353 - 2361556 | 7601.59 |
| hypothetical protein | IM33_11540 | Not Available | Positive | 2361733 - 2362314 | 23588.7 |
| phosphatidate cytidylyltransferase | IM33_11545 | Q4L5W3 | Negative | 2362428 - 2363207 | 28905.6 |
| udp pyrophosphate synthase | IM33_11550 | Q895K8 | Negative | 2363220 - 2363954 | 27949.5 |
| hypothetical protein | IM33_11555 | Not Available | Negative | 2363983 - 2364186 | 7826.46 |
| ribosome recycling factor | IM33_11560 | Q185S5 | Negative | 2364189 - 2364746 | 21095.5 |
| uridylate kinase | IM33_11565 | Q185S7 | Negative | 2364772 - 2365476 | 25829.4 |
| elongation factor ts | IM33_11570 | Q185S9 | Negative | 2365560 - 2366471 | 33142.1 |
| 30s ribosomal protein s2 | IM33_11575 | Q185S8 | Negative | 2366550 - 2367263 | 26844.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
