Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_11410 | Q45614 | Negative | 2334367 - 2335644 | 49798.8 |
| transcriptional regulator | IM33_11415 | P94413 | Negative | 2335628 - 2336296 | 25365.7 |
| atpase | IM33_11420 | Q4A0G1 | Negative | 2336456 - 2338957 | 89450.0 |
| hypothetical protein | IM33_11425 | Not Available | Negative | 2339248 - 2339439 | 7036.48 |
| hypothetical protein | IM33_11430 | Not Available | Negative | 2339587 - 2339826 | 9540.58 |
| gtp-binding protein typa | IM33_11435 | O07631 | Positive | 2340040 - 2341863 | 67922.7 |
| thioredoxin reductase | IM33_11440 | P80880 | Negative | 2341956 - 2342864 | 32536.8 |
| threonine synthase | IM33_11455 | Q8IYQ7 | Positive | 2344381 - 2345862 | 55915.9 |
| serine kinase | IM33_11460 | B1ILR0 | Positive | 2345872 - 2346765 | 32740.5 |
| 2-nitropropane dioxygenase | IM33_11465 | Not Available | Positive | 2346953 - 2347951 | 35825.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
