Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein | IM33_00860 | Not Available | Positive | 140646 - 141062 | 16210.6 |
| flagellar basal body rod protein flgc | IM33_00865 | Not Available | Positive | 141080 - 142390 | 47924.1 |
| flagellar hook protein flgl | IM33_00870 | Not Available | Positive | 142409 - 143341 | 34504.6 |
| flagellar assembly protein fliw | IM33_00875 | Q18CX4 | Positive | 143357 - 143746 | 14643.8 |
| carbon storage regulator | IM33_00880 | Q18CX3 | Positive | 143740 - 143973 | 8620.61 |
| flagellar biosynthesis protein flis | IM33_00885 | Not Available | Positive | 143977 - 144369 | 15262.5 |
| flagellar biosynthesis protein flis | IM33_00890 | Not Available | Positive | 144366 - 144710 | 13214.9 |
| flagellar cap protein flid | IM33_00895 | P39738 | Positive | 144726 - 146240 | 55825.9 |
| hypothetical protein | IM33_00900 | Not Available | Positive | 146243 - 146581 | 13537.4 |
| flagellin | IM33_00905 | Q05203 | Positive | 146684 - 147529 | 29930.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
